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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015881709.1_cds_XP_016437865.1_33586
CDS Infomation

[gene=LOC107763872] [db_xref=GeneID:107763872] [protein=aspartate aminotransferase, chloroplastic-like] [partial=3'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016437865.1] [location=complement(join(<91..355,597..763,1174..1317,2064..2173,2245..2353,2455..2544,2630..2668,2813..3007,4204..4269,4364..4435))] [gbkey=CDS]
Sequence

ATGGCTTCCACAATGTTCTCTCTAGCTTCTGCCGCTCCATCAGCTTCATTTTCCTTGCAA
GATAATCTCAAGTCAAAGCTAAAGCTGGGGACTACTAGCCAAAGTGCCTTTTTCGGGAAA
GACTTCGCGAAGGCAAAGTCAAATGGTCGGACTACTATGGCTGTTTCTGTGAACGTCTCT
CGATTTGAGGGAATAACAATGGCTCCTCCTGACCCCATTCTTGGAGTTTCTGAAGCATTC
AAGGCTGATACAAATGAACTGAAGCTTAACCTTGGAGTTGGAGCTTACCGCACAGAAGAT
CTTCAACCCTATGTCCTCAATGTTGTTAAAAAAGCAGAAAACCTTATGCTAGAGAGAGGT
GACAACAAAGAGTATCTTCCAATAGAAGGTTTGGCTGCATTCAACAAAGTCACAGCAGAG
TTATTGTTTGGAGCAGATAATCCAGTGATTCAGCAACAAAGGGTGGCTACTATTCAAGGT
CTATCAGGAACTGGGTCATTGCGTATTGCTGCAGCACTGATAGAGCGTTACTTCCCTGGC
TCTAAGGTTTTGATATCATCTCCAACCTGGGGAAATCATAAGAACATTTTCAATGATGCC
AGGGTGCCTTGGTCTGAATATCGATATTATGATCCCAAAACAGTTGGTCTAGATTTTGCT
GGGATGATAGAAGATATAAAGGCTGCTCCTGAAGGATCATTCATCTTGCTCCATGGCTGT
GCACACAACCCAACTGGTATTGATCCCACAATTGAACAATGGGAAAAGATTGCTGATGTA
ATTCAGGAGAAGAACCACATTCCATTTTTTGATGTTGCCTACCAGGGATTCGCAAGCGGC
AGCCTTGATGAAGATGCCTCATCTGTGAGATTGTTTGCTGCACGTGGCATGGAGCTTTTG
GTTGCTCAATCATATAGTAAAAATCTGGGTCTGTATGGAGAAAGGATTGGAGCTATTAAT
GTTCTTTGCTCATCTGCTGATGCAGCGACAAGGGTGAAAAGCCAGCTAAAAAGGCTTGCT
CGACCAATGTACTCAAATCCCCCCATTCACGGTGCTAGAATTGTTGCCAATGTCGTTGGA
ATTCCTGAGTTCTTTGATGAATGGAAACAAGAGATGGAAATGATGGCAGGAAGGATAAAG
AGTGTGAGACAGAAGCTATATGATAGCCTCTCCGCCAAGGATAAAAGTGGAAAGGACTGG
TCATACATTCTGAAGCAGATTGGAATGTTCTCCTTCACAGGCCTCAACAAAGCTCAG

Peptide Sequence

PEP ID

XP_016437865.1
PEP Infomation

PREDICTED: aspartate aminotransferase, chloroplastic-like [Nicotiana tabacum]
Sequence

MASTMFSLASAAPSASFSLQDNLKSKLKLGTTSQSAFFGKDFAKAKSNGRTTMAVSVNVS
RFEGITMAPPDPILGVSEAFKADTNELKLNLGVGAYRTEDLQPYVLNVVKKAENLMLERG
DNKEYLPIEGLAAFNKVTAELLFGADNPVIQQQRVATIQGLSGTGSLRIAAALIERYFPG
SKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFAGMIEDIKAAPEGSFILLHGC
AHNPTGIDPTIEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDEDASSVRLFAARGMELL
VAQSYSKNLGLYGERIGAINVLCSSADAATRVKSQLKRLARPMYSNPPIHGARIVANVVG
IPEFFDEWKQEMEMMAGRIKSVRQKLYDSLSAKDKSGKDWSYILKQIGMFSFTGLNKAQS
ENMTNKWHVYMTKDGRISLAGLSAAKCEYLADAIIDSYYNVS

Transcript Sequence

Gene sequence data has not been registered.